CDS

Accession Number TCMCG016C09479
gbkey CDS
Protein Id OMO85487.1
Location join(8748..8985,9749..10040,10614..10860,10934..11119,11346..11510,13436..13549,13756..13842,13934..13939)
Organism Corchorus capsularis
locus_tag CCACVL1_10153

Protein

Length 444aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009593.1
Definition hypothetical protein CCACVL1_10153 [Corchorus capsularis]
Locus_tag CCACVL1_10153

EGGNOG-MAPPER Annotation

COG_category A
Description polyadenylate-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13126        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03018        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0004857        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006446        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008143        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008428        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010494        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019901        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034236        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051018        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060211        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070717        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1900151        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1990841        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCAGCAGCACCACCACCACCGCCGCCGCAGCTGGTGGCAACTGTAGCGGGAGGGACTCCGCTGCAAGTGTCTGCGTTGTACTTCTGTGACTTAGACTTCGATGTTACAAACGACGACCTCTCGAAGAAATTCTCTCCCATTGTTCGCGTCGATCCTCTTCGCATTTTCCGTTGTGAGAGCACCGGAAAGTCTCTTCGTTACGGTTACGTCAACTTCGCGCCTCATTCTGACGCATCTAAGGTTTTAGCTCGTCTAAACCACTCCAAGCTGTTGGAGGGAAAACCAATGGGTATAGTCTGGTCTCTCAGAGATCCTTCACCCAATGTCTATGTCAAGAACCTAGAACCTTCTGTCTCCTGCACTGATTTGGAGGAAGTCTTCTCCCCGTTTGGGACTATTCTTTCTTGTAAGGTTGCTGAAGAAAATGGCGGTTTTGGAAATGTGCAGTTTGATTCAGAGGAAGCAGCCAAGATTTCCATATTCACCCTCACTCTGAATGATACCTTTCTTAAAGGGAAGAAATTGCTAGCGTTAGCTGAAGTACTAGAGGATGATGGTTTAATCCGTCCCAAAGCTGTAAAGAAGAAGAACTTGGTTGCTTTGACTGAGGAGGATGATGATCAACCATGCACTGAGTTGTCTGCAGAGAATCTTGAGCTTCAGCAGGAGCAGATCTGCATTGGAGAAGCAGAAGAAAGCGACAGCTTCGACCCTCCGGTCAGGCTAGCGCTAGCTGAAGAGGAGGATGATGGTATAATCCGTCCCAAAGCTGAGCAGATCTGCATTGGAGAAGCAGAAGAAAGCGACAGCTTCGACCCTCCGGTCAGGCTAGCGCTAGCTGAAGAGGAGGACGATGGTTTAATCCGTCCCAAAGCTGTAAAGAAGAAGAACTTGGTTGCTTTGACTGAGGAGGATGATGATCAACCATGCACTGAGTTGTCTGCAGAGAATCTTGAGGCAGAAGAAAGCGACAGCTTCGACCCTCCGGTCAGGCTAGCGCTAACTGAAGAGGAGGACGATGGTTTAATCCGTCCCAAAGCTGTAAAGAAGAAGAACTTGGTTACCTTGACTGAGGAGGATGATGATCAACCATGCACTGAGTTGTCTGCAAAGAATCTTGAGGGTGAAGCTTACAAGTTATTCTGGCCAGAGCAATCTGGGTTTGTGAGGAAGGCAGCTAGATTTGGAGCCAAAATTGTCCCTTTTGGTGTTGTTGGGGAGGATGATATAGCTAAGTTAATTATGGATTACAATGACCAAATGAAGATTCCATGGAGAAAAGGAAGAAATAGAACGAATGACAAATCGGTTTTCAAGATTGAGGATTAA
Protein:  
MASAAPPPPPPQLVATVAGGTPLQVSALYFCDLDFDVTNDDLSKKFSPIVRVDPLRIFRCESTGKSLRYGYVNFAPHSDASKVLARLNHSKLLEGKPMGIVWSLRDPSPNVYVKNLEPSVSCTDLEEVFSPFGTILSCKVAEENGGFGNVQFDSEEAAKISIFTLTLNDTFLKGKKLLALAEVLEDDGLIRPKAVKKKNLVALTEEDDDQPCTELSAENLELQQEQICIGEAEESDSFDPPVRLALAEEEDDGIIRPKAEQICIGEAEESDSFDPPVRLALAEEEDDGLIRPKAVKKKNLVALTEEDDDQPCTELSAENLEAEESDSFDPPVRLALTEEEDDGLIRPKAVKKKNLVTLTEEDDDQPCTELSAKNLEGEAYKLFWPEQSGFVRKAARFGAKIVPFGVVGEDDIAKLIMDYNDQMKIPWRKGRNRTNDKSVFKIED